TWO MEASURES OF EFFECTIVE POPULATION SIZE FOR GRAPHS
نویسندگان
چکیده
منابع مشابه
Estimation of effective population size and migration rate from one- and two-locus identity measures.
Standard methods for inferring demographic parameters from genetic data are based mainly on one-locus theory. However, the association of genes at different loci (e.g., two-locus identity disequilibrium) may also contain some information about demographic parameters of populations. In this article, we define one- and two-locus parameters of population structure as functions of one- and two-locu...
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What is it? An aid to calculation in population genetics, introduced by Sewall Wright. The rate of change of the genetic make-up of a population by genetic drift — fluctuations in allele frequencies caused by random sampling — is inversely related to the effective population size, Ne. Ne is measured with reference to an ideal ‘Wright–Fisher’ population. This has a fixed number of N diploid bree...
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Quantitative properties of timed regular languages, such as information content (growth rate, entropy) are explored. The approach suggested by the same authors is extended to languages of timed automata with punctual (equalities) and non-punctual (non-equalities) transition guards. Two size measures for such languages are identified: mean dimension and volumetric entropy. The former is the line...
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The Effective Sample Size (ESS) is an important measure of efficiency of Monte Carlo methods such as Markov Chain Monte Carlo (MCMC) and Importance Sampling (IS) techniques. In the IS context, an approximation ÊSS of the theoretical ESS definition is widely applied, involving the inverse of the sum of the squares of the normalized importance weights. This formula, ÊSS, has become an essential p...
متن کاملThe effective size of a subdivided population.
This paper derives the long-term effective size, Ne, for a general model of population subdivision, allowing for differential deme fitness, variable emigration and immigration rates, extinction, colonization, and correlations across generations in these processes. We show that various long-term measures of Ne are equivalent. The effective size of a metapopulation can be expressed in a variety o...
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ژورنال
عنوان ژورنال: Evolution
سال: 2012
ISSN: 0014-3820
DOI: 10.1111/j.1558-5646.2011.01528.x